Package | Description |
---|---|
htsjdk.tribble | |
htsjdk.tribble.example | |
htsjdk.tribble.readers | |
htsjdk.variant.bcf2 |
Modifier and Type | Method and Description |
---|---|
PositionalBufferedStream |
BinaryFeatureCodec.makeSourceFromStream(InputStream bufferedInputStream) |
Modifier and Type | Method and Description |
---|---|
void |
BinaryFeatureCodec.close(PositionalBufferedStream source) |
boolean |
BinaryFeatureCodec.isDone(PositionalBufferedStream source) |
Modifier and Type | Method and Description |
---|---|
Feature |
ExampleBinaryCodec.decode(PositionalBufferedStream stream) |
Feature |
ExampleBinaryCodec.decodeLoc(PositionalBufferedStream stream) |
FeatureCodecHeader |
ExampleBinaryCodec.readHeader(PositionalBufferedStream stream) |
Modifier and Type | Method and Description |
---|---|
String |
AsciiLineReader.readLine(PositionalBufferedStream stream)
Read a line of text.
|
Constructor and Description |
---|
AsciiLineReader(PositionalBufferedStream is) |
Modifier and Type | Method and Description |
---|---|
VariantContext |
BCF2Codec.decode(PositionalBufferedStream inputStream) |
Feature |
BCF2Codec.decodeLoc(PositionalBufferedStream inputStream) |
FeatureCodecHeader |
BCF2Codec.readHeader(PositionalBufferedStream inputStream) |