Package | Description |
---|---|
htsjdk.samtools | |
htsjdk.samtools.sra |
Class and Description |
---|
ReferenceCache
That is a thread-safe wrapper for a list of cache Reference objects.
|
SRAAccession
Describes a single SRA accession for SRA read collection
Also provides app string functionality and allows to check if working SRA is supported on the running platform
Important: due to checks performed in SRAAccession.isValid(), we won't recognise any accessions other
than ones that follow the pattern "^[SED]RR[0-9]{6,9}$", e.g.
|
Class and Description |
---|
ReferenceCache
That is a thread-safe wrapper for a list of cache Reference objects.
|
SRAAccession
Describes a single SRA accession for SRA read collection
Also provides app string functionality and allows to check if working SRA is supported on the running platform
Important: due to checks performed in SRAAccession.isValid(), we won't recognise any accessions other
than ones that follow the pattern "^[SED]RR[0-9]{6,9}$", e.g.
|