public static final class SamLocusIterator.LocusInfo extends Object implements Locus
Modifier and Type | Method and Description |
---|---|
void |
add(SAMRecord read,
int position)
Accumulate info for one read at the locus.
|
int |
getPosition() |
List<SamLocusIterator.RecordAndOffset> |
getRecordAndPositions() |
int |
getSequenceIndex() |
int |
getSequenceLength() |
String |
getSequenceName() |
String |
toString() |
public void add(SAMRecord read, int position)
public int getSequenceIndex()
getSequenceIndex
in interface Locus
public int getPosition()
getPosition
in interface Locus
public List<SamLocusIterator.RecordAndOffset> getRecordAndPositions()
public String getSequenceName()
public int getSequenceLength()