Package | Description |
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htsjdk.samtools.metrics | |
htsjdk.samtools.util |
Modifier and Type | Method and Description |
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Histogram<HKEY> |
MetricsFile.getHistogram()
Returns the histogram contained in the metrics file if any.
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Modifier and Type | Method and Description |
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List<Histogram<HKEY>> |
MetricsFile.getAllHistograms() |
Modifier and Type | Method and Description |
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void |
MetricsFile.addHistogram(Histogram<HKEY> histogram)
Adds a histogram to the list of histograms in the metrics file.
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void |
MetricsFile.setHistogram(Histogram<HKEY> histogram)
Sets the histogram contained in the metrics file.
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Modifier and Type | Method and Description |
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Histogram<K> |
Histogram.divideByHistogram(Histogram<K> divisorHistogram)
Immutable method that divides the current Histogram by an input Histogram and generates a new one
Throws an exception if the bins don't match up exactly
|
Modifier and Type | Method and Description |
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void |
Histogram.addHistogram(Histogram<K> addHistogram)
Mutable method that allows the addition of a Histogram into the current one.
|
Histogram<K> |
Histogram.divideByHistogram(Histogram<K> divisorHistogram)
Immutable method that divides the current Histogram by an input Histogram and generates a new one
Throws an exception if the bins don't match up exactly
|
Constructor and Description |
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Histogram(Histogram<K> in)
Copy constructor for a histogram.
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