public class Tribble extends Object
Modifier and Type | Field and Description |
---|---|
static String |
STANDARD_INDEX_EXTENSION |
Modifier and Type | Method and Description |
---|---|
static File |
indexFile(File file)
Return the File of the index file for the provided vcf
file
Does not actually create an index |
static String |
indexFile(String filename)
Return the name of the index file for the provided vcf
filename
Does not actually create an index |
static File |
tabixIndexFile(File file)
Return the File of the tabix index file for the provided vcf
file
Does not actually create an index |
static String |
tabixIndexFile(String filename)
Return the name of the tabix index file for the provided vcf
filename
Does not actually create an index |
public static final String STANDARD_INDEX_EXTENSION
public static String indexFile(String filename)
filename
Does not actually create an indexfilename
- name of the vcf filepublic static File indexFile(File file)
file
Does not actually create an indexfile
- the vcf filepublic static String tabixIndexFile(String filename)
filename
Does not actually create an indexfilename
- name of the vcf file